PID	ProteinName	Score	Strand	GeneStart	GeneEnd	NonCodingStart	NonCodingEnd	NonCodingLength	Organism	Description
13508270	MPN531	3432	-	651802	653949	653950	654124	175	Mycoplasma pneumoniae	ATP-dependent protease binding subunit ClpB
12045215	MG355	2889	-	451613	453757	453758	453910	153	Mycoplasma genitalium	ATP-dependent Clp protease, ATPase subunit (clpB)
13357952	UU391	1926	+	451524	453638	451418	451523	106	Ureaplasma urealyticum	ATP-dependent serine proteinase - heat shock protein
15673507	L166407	1693	-	1566658	1569261	1569262	1569494	233	Lactococcus lactis subsp. lactis	ClpB protein
16331048	slr1641	1675	+	2062905	2065523	2062622	2062904	283	Synechocystis sp. PCC 6803	ClpB protein
16272799	HI0859	1659	+	906976	909546	906849	906975	127	Haemophilus influenzae Rd	COG0542 HI0859 ATP-dependent Clp protease, ATPase subunit (clpB)
15794576	NMA1683	1652	+	1605805	1608384	1605545	1605804	260	Neisseria meningitidis serogroup A strain Z2491 complete genome	ClpB protein
15677326	NMB1472	1651	+	1520761	1523340	1520501	1520760	260	Neisseria meningitidis serogroup B strain MC58 complete genome	clpB protein
15603915	RP036	1650	+	38374	40950	37348	38373	1026	Rickettsia prowazekii strain Madrid E	CLPB PROTEIN (clpB)
16331154	slr0156	1637	+	2194405	2197101	2193813	2194404	592	Synechocystis sp. PCC 6803	ClpB protein

Alignment Score 115857

NMA1683         ---MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNSGAAALLAHAGVNV
NMB1472         ---MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHAGVNV
HI0859          ---MNIEKFTTKFQEALSERQSLAIGKDNQFIEPVHLLTALLNQQGGSIAPILTASGVNV
slr1641         MQPTDPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQN-GLATSIFNKAGASI
slr0156         MQPTDPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDG
RP036           ---MNIDKFTAHAKSVIANHQSLAIKNDHQQILPLHLLSSLLSEETGIIQALINNIGGNI
L166407         ---MDIEKMTTTMQEALGSAQQIAQVRHHQVIEVPHLWRIFVQPN-SFGANFYKDLGIDL
MPN531          ------------------------------------------------------------
MG355           ------------------------------------------------------------
UU391           ------------------------------------------------------------
                                                                            

NMA1683         PQVKQRLQQHLNSLPKVSGQ--GGDILPSRELQAVLNLMDKAATKRGDAYIASELFLLAL
NMB1472         PQVKQRLQQHLNSLPKVSGQ--GGDILPSRELQAVLNLMDKAATKRSDAYIASELFLLAL
HI0859          ALLRNELKTELNKLPQVIGN--GGDVQLSRQLINLLNLCDKFAQQNQDKFISSELFLFAA
slr1641         PRVNDQVNSFIAQQPKLSNP--SESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAY
slr0156         EGLRQQLEIFTNRQPKQAY---VEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGF
RP036           NLLKDQVQLELNKIPKIQVDG-GGQIYYSAEDLKVLEKSSSIAKDSGDSFVTIERIFEAL
L166407         DDYTNLIEKEIDKINSVEGSNITYGQNLSPDLFQIFTEADKIAQKMGDEYLSTEIILLAL
MPN531          ------------------------------------------------------------
MG355           ------------------------------------------------------------
UU391           ------------------------------------------------------------
                                                                            

NMA1683         VQQND-AAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARD
NMB1472         VQQND-ATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARD
HI0859          LEERG-TISDILKKCGAKKEQISQAIQHIRGGQNVNDQNAEESRQALEKYTIDLTARAES
slr1641         GQDDR-LGKNLYREIGLTENKLAEIIKQIRGTQKVTDQNPEGKYESLEKYGRDLTELARE
slr0156         AEDDR-VGRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQ
RP036           TYDNT-IAGKILTNNGINSKKLATAILHLRKGKKADTESAENNYDALKRYGRDVTELAEN
L166407         FELKQNPLTSYLVSHGLTKAKAQAAIEKLRGGDKVTSQNAEETYKALEKYGVDLVAQVKS
MPN531          --------------------------------MDFSFTPTPDKRDFLKEMGRSINDEVLK
MG355           --------------------------------MNINFTPAGENRNFLQEIGRNINDEVLK
UU391           ----------------------------------MEFKQKNSN-NPLEEFGRNLNKEILD
                                                            . *..   .:     .

NMA1683         GKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRN
NMB1472         GKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRN
HI0859          GKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKN
slr1641         GKLDPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRD
slr0156         GKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKN
RP036           GKLDPIIGRDEEIRRAVQVLSRRMKNNPVLIGAPGVGKTAIIEGLAQRIFSKDVPETLIN
L166407         GKQDPVIGRDEEIRDVIRVLSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKD
MPN531          NKVDPIIGRDNEIRRLIEILSRKNKNNPVLIGEPGVGKTAIVEGFVRRVVNNDVPLNLRD
MG355           NKVDPIIGRDNEIRRLIEILSRKSKNNPVLIGEPGVGKTAIVEGFVRRVVSNDVPLNLRD
UU391           NKIDPIIGRDEEIRRTIEILSRKTKNNPVLIGEPGVGKTAIVEGLAYRIVHKDVPSNLLD
                .* **:****:*:*  :.:*.*: ******** ******** **:. *:.  :**  * :

NMA1683         KRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDG--A
NMB1472         KRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDG--A
HI0859          KRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDG--A
slr1641         RKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQG--A
slr0156         RQLISLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGS
RP036           CRIIELDIGALIAGAQYRGEFEKRLKAVLSEIKESSGEIILFIDELHLLVGTGKVDG--A
L166407         KTIFSLDMGALIAGAKYRGEFEERLKAVLNEVKKSDGQIILFIDELHTIVGAGKTEG--S
MPN531          VEIYELSLSGLIAGTQYQGEFEKRVNGILKQVKESNGKIILFIDEIHQIVGLGRNSSSGA
MG355           VEIYELSLSGLIAGTKFQGEFEKRINTILKQVKESNGRIILFIDEIHQIVGLGRNSSSGA
UU391           KTIIELSLSSLIAGASYQGQFEERINSILKEVKKADGNIILFIDEIHQIVGMGRNQGS-N
                  :  *.:..****:.::*:**:*:. ::.:: . .*. ::****:* :** *  ..   

NMA1683         MDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRG
NMB1472         MDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRG
HI0859          MDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRG
slr1641         MDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRG
slr0156         MDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRG
RP036           MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRG
L166407         MDAGNLLKPMLARGELHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTISILRG
MPN531          MDIANILKPMLARGEIKVIGATTLKEYREYVEKDGALERRFQKILVSEPSQQEALTIMRG
MG355           MDIANILKPMLARGEIKVIGATTLKEYREYIEKDGALERRFQKILINEPSSQEALTIMRG
UU391           MDVANILKPMMARGEIKLIGATTLDEYRLYIEKDQALERRFTKVLVNKPTIQETLTIMRG
                ** .*:*** :*** :: :*****.***  :*.* ** ***  : : :*.  ::::*:**

NMA1683         LQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAM
NMB1472         LQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAM
HI0859          LKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPL
slr1641         LKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEEL
slr0156         LKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVEL
RP036           IKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEEL
L166407         LKERFEIHHGVTIHDNALVAAATLSNRYITDRFLPDKAIDLVDEASATIRVEMNSLPTEL
MPN531          LKTRWELFHNLTIFDSALVAAVEMSARYIPDRNLPDKAIDLIDEASAKIKTEMASEPVVI
MG355           LKTRWELFHNITIFDSALVAAVEMSTRYINERNLPDKAIDLIDEAAAKIKTEMSSEPVAI
UU391           LKPRWEAFHGIKIHDNALIAAVNLSERYINDRNLPDKAIDLIDEAAAKIKTQINSQPIYL
                :: ::* .* : * * *::**. :* *** :* ********:***.: :: :  : *  :

NMA1683         DKIDRRLIQLRMEKAHVEKEK-------DDASKKR----LELIDEEINGLQKEYADLDEI
NMB1472         DKIDRRLIQLRMEKAHVEKEK-------DDASKKR----LELIDEEINGLQKEYADLDEI
HI0859          DRLERRIIQLKLEQQALQKEE-------DEASRKR----LEMLEKELAEKEREYAELEEV
slr1641         DEVDRKILQLEMERLSLQREN-------DSASKER----LEKLEKELADFKEEQSKLNGQ
slr0156         EDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKER----LEKIQQEITELEGQQQELSGQ
RP036           DELDRRIIQIKIELAALKKEN-------DEHSKKK----ITSLTEELKKLESKSYDMNTK
L166407         DQANRRLMQLEIEEAALKKER-------DDASKKR----LEIIRGEIAELREENNQLKAQ
MPN531          DTLKREIINLETEYAALKQDK-------ENADNKKKQGHLDNLKQQLDELKKKRDSLTAE
MG355           DSLKREIINLETEYAALKQDK-------ENDNKQSKKEYLEKLKKQLDALKQKRDSLINE
UU391           DEIKRDLQHLQTEKAALEPEK-------DEKSIKRLNEILEKIKLKQDEFN----NLNDL
                :  .* : ::. *   :: :.       :. . :     :  :  :    .    .:   

NMA1683         WKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADT
NMB1472         WKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADT
HI0859          WKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEG
slr1641         WQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLA
slr0156         WLSEKQMLEEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLL
RP036           WQAEKSKLQQAQKLKEELEQARIDLERAERDANLAKASELKYGIIPEIMNKLQEAENMDN
L166407         WEAEKKEVGNISEKRNELEHARHELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAK
MPN531          WKKEKTNFESINKLKKEIEDLQTRLELYQTEGNYEAASKILYYDIPKLKNQLEQAQKKYV
MG355           WKKEKADFENINKLKKEIEEFQTKLETYQSEGNYESASKILYSDIPRLKKELESAQQKYA
UU391           YLKEKKQIDDLKNLRQKIERIQHDIEFYQSEGKYEKASRLLYSDLPLFEKQREELENKIN
                :  **         ::  :  .  ::  .   .    : : *  :  : ..    :    

NMA1683         DSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAV
NMB1472         DSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAV
HI0859          KEMT----LLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAV
slr1641         EQQTSGKSLLREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAV
slr0156         EIQGSGNTLLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAV
RP036           ------KGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLVIEQKLCESVIGQDEAI
L166407         SDD---LSLVQESVTEEQITEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAV
MPN531          DS---KHDLFKTEVSENEVAEVVSQATGIPLKKLLETEKEKLLHLGDEIKKRVKGQDAAV
MG355           TS---KHDLFKTEVSENEIAEVISQTTGIPLKKLLESEKDKLLHLGDEIKKRVKGQDEAI
UU391           ENN--NQKMIIDSLTENEIADVIARATGIPLSHLLADEKTKLLSLNKRIASHVIGQDEAV
                        :.   :  .:::.::.  ****:  ::  *: :** :   :   * **. *:

NMA1683         RAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEY
NMB1472         RAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEY
HI0859          DAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEF
slr1641         TAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEY
slr0156         AAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEY
RP036           KGVSDAVRRSRSGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNALLRIDMSEY
L166407         EAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEY
MPN531          ETVVNTVMRGRVNLNDPNRPIGSFIFLGSTGVGKTELAKSLAEVLFDNEKAMIRFDMSEY
MG355           DAVVNTVIRGRVNINDPNKPIGSFIFLGSTGVGKTELAKSLAEVLFDNEKALIRFDMSEY
UU391           KLISDAVIRGRAGINNPNQPIGSFLFLGPTGVGKTELAKTLAKELFNSEKALIRFDMSEY
                  :  :: *.* .: : .:* .**:*:*.******** ::**  **: .. ::*:****:

NMA1683         MEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDG
NMB1472         MEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDG
HI0859          MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVLDDG
slr1641         MEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDG
slr0156         MEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDG
RP036           MEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEG
L166407         MEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDG
MPN531          MEKHSVAKLIGAPPGYVGYEQSGLLTEAVRRKPYCVLLFDEIEKAHPDVTNILLQVLDDG
MG355           MEKHSVAKLIGAPPGYIGYEQSGLLTEAVRRKPYSVLLFDEIEKAHPDVTNVLLQVLDDG
UU391           MEKHSVSKLVGAPPGYIGYENAGVLTESVKRKPYSILLFDEIEKAHPDILNILLQILDEG
                ****::::*:******:**::.* *:* ::*.** ::*:**:**** *: *::**:**:*

NMA1683         RLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ-MGIQD--YEAVKEVVMEDVKEHFRPEMIN
NMB1472         RLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ-MGIQD--YEAVKEVVMEDVKEHFRPEMIN
HI0859          RLTDGQGRTVDFRNTVVIMTSNLGSDLIQG-NKDES--YSEMKALVMSVVSQHFRPEFIN
slr1641         RLTDAQGHVVDFKNTIIIMTSNLGSQYILD-VAGDDSRYEEMRSRVMDVMRENFRPEFLN
slr0156         RITDSQGRVVDFRNTIIVMTSNIGSDHILS-LSADDADYDKMQKQVLQSLRKHFRPEFLN
RP036           RLTDSQGITVDFKNTIIVLTSNLGAEILVN-QKEGE-DTYKVRDEVMQYVRAVFKPEFLN
L166407         RLTDSKGVLVDFKNTVLIMTSNVGSQYLLDNVGENGEISEETTENVMSQLRAHFKPEFLN
MPN531          TLKDSQGRLVNFKNTMIIMTSNLGSNYIME----------NKRDLAMEALKKHFRAEFIN
MG355           TLKDSQGRVVNFKNTLIIMTSNLGSNFLLE----------GKKDLAIQSLKKHFRPEFIN
UU391           SIKDAKNNEINFKNTIIIMTSNIGAEALLE----------NNKTKALLDLQKTFKPEILN
                 :.*.:.  ::*:**::::***:*:: :                 .:  :   *:.*::*

NMA1683         RIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGAR
NMB1472         RIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGAR
HI0859          RIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGAR
slr1641         RVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGAR
slr0156         RIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGAR
RP036           RLDEIILFHRLNRNNIHDIVKIQLGSLKKILLQQNIILEFDESALNYLAEKGYDPSFGAR
L166407         RIDDTILFKPLALEDIKNIIVKMTSQLSHRLEEMDVQLELSEEVKVWIAENAYEPAYGAR
MPN531          RIDEIVFFSVLQKTTVLEIITNLLDQLNQRLAKQNLKFTFDPKLNEFIYKSSFDEQFGAR
MG355           RIDEIVFFNVLEKDTVLSIINSLLAQLSKRLNKQNLFFNFDSNLTEFIYKSSFDQQFGAR
UU391           RISEIIFFNKLSKEIIFKISENLLKELENLLAKQDYLIKFDDNIAQIMVEDAYSSNYGAR
                *:.: :.*  *    :  *       :   :      : .       :   .:.  :***

NMA1683         PLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA-------------------
NMB1472         PLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA-------------------
HI0859          PLKRAIQQEIENSLAQQILSGALLPGKVVTIDYANAEVQARQ------------------
slr1641         PLKRAVQKYLETAIAKGILRGDYKPGETIVVDETDERLSF------TSLRG----DLVIV
slr0156         PLKRAIQRQLENPIATKILENTFVAGDKILIDCVDGQLIFDKEIEPTTLPEEPEENITAV
RP036           PLKRLIQREIQNNLAKMILAGEISSGNTVKIRREKEELSINIID----------------
L166407         PLKRYLTKVIENPLAKLIIGGKIPPKSKVIVTLVENKIDFDIQTIAE-------------
MPN531          PIKRFIDRQIATLIAKQILEGIITKDVSYNVIVEKDKVAIVANKVKS-------------
MG355           PIKRFIDHSVATLIAKYILQGKIKKGVGYNIAVVKDNITITQNNKS--------------
UU391           PLKRWITKHLENEIAKLIIENRITKNINYKINYDRELDQVLIK-----------------
                *:** :   : . :*  :: .         :                             

NMA1683         -------
NMB1472         -------
HI0859          -------
slr1641         -------
slr0156         EVEVLSS
RP036           -------
L166407         -------
MPN531          -------
MG355           -------
UU391           -------