PID ProteinName Score Strand GeneStart GeneEnd NonCodingStart NonCodingEnd NonCodingLength Organism Description 13508270 MPN531 3432 - 651802 653949 653950 654124 175 Mycoplasma pneumoniae ATP-dependent protease binding subunit ClpB 12045215 MG355 2889 - 451613 453757 453758 453910 153 Mycoplasma genitalium ATP-dependent Clp protease, ATPase subunit (clpB) 13357952 UU391 1926 + 451524 453638 451418 451523 106 Ureaplasma urealyticum ATP-dependent serine proteinase - heat shock protein 15673507 L166407 1693 - 1566658 1569261 1569262 1569494 233 Lactococcus lactis subsp. lactis ClpB protein 16331048 slr1641 1675 + 2062905 2065523 2062622 2062904 283 Synechocystis sp. PCC 6803 ClpB protein 16272799 HI0859 1659 + 906976 909546 906849 906975 127 Haemophilus influenzae Rd COG0542 HI0859 ATP-dependent Clp protease, ATPase subunit (clpB) 15794576 NMA1683 1652 + 1605805 1608384 1605545 1605804 260 Neisseria meningitidis serogroup A strain Z2491 complete genome ClpB protein 15677326 NMB1472 1651 + 1520761 1523340 1520501 1520760 260 Neisseria meningitidis serogroup B strain MC58 complete genome clpB protein 15603915 RP036 1650 + 38374 40950 37348 38373 1026 Rickettsia prowazekii strain Madrid E CLPB PROTEIN (clpB) 16331154 slr0156 1637 + 2194405 2197101 2193813 2194404 592 Synechocystis sp. PCC 6803 ClpB protein Alignment Score 115857 NMA1683 ---MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNSGAAALLAHAGVNV NMB1472 ---MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHAGVNV HI0859 ---MNIEKFTTKFQEALSERQSLAIGKDNQFIEPVHLLTALLNQQGGSIAPILTASGVNV slr1641 MQPTDPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQN-GLATSIFNKAGASI slr0156 MQPTDPTKFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDG RP036 ---MNIDKFTAHAKSVIANHQSLAIKNDHQQILPLHLLSSLLSEETGIIQALINNIGGNI L166407 ---MDIEKMTTTMQEALGSAQQIAQVRHHQVIEVPHLWRIFVQPN-SFGANFYKDLGIDL MPN531 ------------------------------------------------------------ MG355 ------------------------------------------------------------ UU391 ------------------------------------------------------------ NMA1683 PQVKQRLQQHLNSLPKVSGQ--GGDILPSRELQAVLNLMDKAATKRGDAYIASELFLLAL NMB1472 PQVKQRLQQHLNSLPKVSGQ--GGDILPSRELQAVLNLMDKAATKRSDAYIASELFLLAL HI0859 ALLRNELKTELNKLPQVIGN--GGDVQLSRQLINLLNLCDKFAQQNQDKFISSELFLFAA slr1641 PRVNDQVNSFIAQQPKLSNP--SESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAY slr0156 EGLRQQLEIFTNRQPKQAY---VEQLYLGRSLDVMLDRADAARSSWEDKFISVEHLLVGF RP036 NLLKDQVQLELNKIPKIQVDG-GGQIYYSAEDLKVLEKSSSIAKDSGDSFVTIERIFEAL L166407 DDYTNLIEKEIDKINSVEGSNITYGQNLSPDLFQIFTEADKIAQKMGDEYLSTEIILLAL MPN531 ------------------------------------------------------------ MG355 ------------------------------------------------------------ UU391 ------------------------------------------------------------ NMA1683 VQQND-AAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARD NMB1472 VQQND-ATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDALKKYTLDLTQRARD HI0859 LEERG-TISDILKKCGAKKEQISQAIQHIRGGQNVNDQNAEESRQALEKYTIDLTARAES slr1641 GQDDR-LGKNLYREIGLTENKLAEIIKQIRGTQKVTDQNPEGKYESLEKYGRDLTELARE slr0156 AEDDR-VGRKTLRAFNLDPQDLELAIKAIRGSQKVTEPNQEEKYEALDKYGRDLTEQARQ RP036 TYDNT-IAGKILTNNGINSKKLATAILHLRKGKKADTESAENNYDALKRYGRDVTELAEN L166407 FELKQNPLTSYLVSHGLTKAKAQAAIEKLRGGDKVTSQNAEETYKALEKYGVDLVAQVKS MPN531 --------------------------------MDFSFTPTPDKRDFLKEMGRSINDEVLK MG355 --------------------------------MNINFTPAGENRNFLQEIGRNINDEVLK UU391 ----------------------------------MEFKQKNSN-NPLEEFGRNLNKEILD . *.. .: . NMA1683 GKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRN NMB1472 GKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRN HI0859 GKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKN slr1641 GKLDPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRD slr0156 GKLDPVIGRDEEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEGLAQRIINGDVPESLKN RP036 GKLDPIIGRDEEIRRAVQVLSRRMKNNPVLIGAPGVGKTAIIEGLAQRIFSKDVPETLIN L166407 GKQDPVIGRDEEIRDVIRVLSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKD MPN531 NKVDPIIGRDNEIRRLIEILSRKNKNNPVLIGEPGVGKTAIVEGFVRRVVNNDVPLNLRD MG355 NKVDPIIGRDNEIRRLIEILSRKSKNNPVLIGEPGVGKTAIVEGFVRRVVSNDVPLNLRD UU391 NKIDPIIGRDEEIRRTIEILSRKTKNNPVLIGEPGVGKTAIVEGLAYRIVHKDVPSNLLD .* **:****:*:* :.:*.*: ******** ******** **:. *:. :** * : NMA1683 KRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDG--A NMB1472 KRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDG--A HI0859 KRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDG--A slr1641 RKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQG--A slr0156 RQLISLDMGSLIAGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGS RP036 CRIIELDIGALIAGAQYRGEFEKRLKAVLSEIKESSGEIILFIDELHLLVGTGKVDG--A L166407 KTIFSLDMGALIAGAKYRGEFEERLKAVLNEVKKSDGQIILFIDELHTIVGAGKTEG--S MPN531 VEIYELSLSGLIAGTQYQGEFEKRVNGILKQVKESNGKIILFIDEIHQIVGLGRNSSSGA MG355 VEIYELSLSGLIAGTKFQGEFEKRINTILKQVKESNGRIILFIDEIHQIVGLGRNSSSGA UU391 KTIIELSLSSLIAGASYQGQFEERINSILKEVKKADGNIILFIDEIHQIVGMGRNQGS-N : *.:..****:.::*:**:*:. ::.:: . .*. ::****:* :** * .. NMA1683 MDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRG NMB1472 MDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIAILRG HI0859 MDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRG slr1641 MDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRG slr0156 MDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRG RP036 MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRG L166407 MDAGNLLKPMLARGELHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTISILRG MPN531 MDIANILKPMLARGEIKVIGATTLKEYREYVEKDGALERRFQKILVSEPSQQEALTIMRG MG355 MDIANILKPMLARGEIKVIGATTLKEYREYIEKDGALERRFQKILINEPSSQEALTIMRG UU391 MDVANILKPMMARGEIKLIGATTLDEYRLYIEKDQALERRFTKVLVNKPTIQETLTIMRG ** .*:*** :*** :: :*****.*** :*.* ** *** : : :*. ::::*:** NMA1683 LQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAM NMB1472 LQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASRVKMEKETKPEAM HI0859 LKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPL slr1641 LKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEEL slr0156 LKEKYEVHHGVKITDSALVAAATLSHRYIQDRFLPDKAIDLVDEAAARLKMEITSKPVEL RP036 IKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEEL L166407 LKERFEIHHGVTIHDNALVAAATLSNRYITDRFLPDKAIDLVDEASATIRVEMNSLPTEL MPN531 LKTRWELFHNLTIFDSALVAAVEMSARYIPDRNLPDKAIDLIDEASAKIKTEMASEPVVI MG355 LKTRWELFHNITIFDSALVAAVEMSTRYINERNLPDKAIDLIDEAAAKIKTEMSSEPVAI UU391 LKPRWEAFHGIKIHDNALIAAVNLSERYINDRNLPDKAIDLIDEAAAKIKTQINSQPIYL :: ::* .* : * * *::**. :* *** :* ********:***.: :: : : * : NMA1683 DKIDRRLIQLRMEKAHVEKEK-------DDASKKR----LELIDEEINGLQKEYADLDEI NMB1472 DKIDRRLIQLRMEKAHVEKEK-------DDASKKR----LELIDEEINGLQKEYADLDEI HI0859 DRLERRIIQLKLEQQALQKEE-------DEASRKR----LEMLEKELAEKEREYAELEEV slr1641 DEVDRKILQLEMERLSLQREN-------DSASKER----LEKLEKELADFKEEQSKLNGQ slr0156 EDIDRRLMQLQMEKLSLEGEEKRPGLGADKSSKER----LEKIQQEITELEGQQQELSGQ RP036 DELDRRIIQIKIELAALKKEN-------DEHSKKK----ITSLTEELKKLESKSYDMNTK L166407 DQANRRLMQLEIEEAALKKER-------DDASKKR----LEIIRGEIAELREENNQLKAQ MPN531 DTLKREIINLETEYAALKQDK-------ENADNKKKQGHLDNLKQQLDELKKKRDSLTAE MG355 DSLKREIINLETEYAALKQDK-------ENDNKQSKKEYLEKLKKQLDALKQKRDSLINE UU391 DEIKRDLQHLQTEKAALEPEK-------DEKSIKRLNEILEKIKLKQDEFN----NLNDL : .* : ::. * :: :. :. . : : : : . .: NMA1683 WKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADT NMB1472 WKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADT HI0859 WKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEG slr1641 WQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLA slr0156 WLSEKQMLEEINTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLL RP036 WQAEKSKLQQAQKLKEELEQARIDLERAERDANLAKASELKYGIIPEIMNKLQEAENMDN L166407 WEAEKKEVGNISEKRNELEHARHELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAK MPN531 WKKEKTNFESINKLKKEIEDLQTRLELYQTEGNYEAASKILYYDIPKLKNQLEQAQKKYV MG355 WKKEKADFENINKLKKEIEEFQTKLETYQSEGNYESASKILYSDIPRLKKELESAQQKYA UU391 YLKEKKQIDDLKNLRQKIERIQHDIEFYQSEGKYEKASRLLYSDLPLFEKQREELENKIN : ** :: : . :: . . : : * : : .. : NMA1683 DSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAV NMB1472 DSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKMEEVLHRRVVGQDEAV HI0859 KEMT----LLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAV slr1641 EQQTSGKSLLREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAV slr0156 EIQGSGNTLLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAV RP036 ------KGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLVIEQKLCESVIGQDEAI L166407 SDD---LSLVQESVTEEQITEVVGRMTGIPITKLVEGEREKLLHLPETLHQRVVGQDEAV MPN531 DS---KHDLFKTEVSENEVAEVVSQATGIPLKKLLETEKEKLLHLGDEIKKRVKGQDAAV MG355 TS---KHDLFKTEVSENEIAEVISQTTGIPLKKLLESEKDKLLHLGDEIKKRVKGQDEAI UU391 ENN--NQKMIIDSLTENEIADVIARATGIPLSHLLADEKTKLLSLNKRIASHVIGQDEAV :. : .:::.::. ****: :: *: :** : : * **. *: NMA1683 RAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEY NMB1472 RAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEY HI0859 DAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEF slr1641 TAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEY slr0156 AAVSAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAGFLFDSEEAMVRIDMSEY RP036 KGVSDAVRRSRSGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNALLRIDMSEY L166407 EAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEY MPN531 ETVVNTVMRGRVNLNDPNRPIGSFIFLGSTGVGKTELAKSLAEVLFDNEKAMIRFDMSEY MG355 DAVVNTVIRGRVNINDPNKPIGSFIFLGSTGVGKTELAKSLAEVLFDNEKALIRFDMSEY UU391 KLISDAVIRGRAGINNPNQPIGSFLFLGPTGVGKTELAKTLAKELFNSEKALIRFDMSEY : :: *.* .: : .:* .**:*:*.******** ::** **: .. ::*:****: NMA1683 MEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDG NMB1472 MEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDG HI0859 MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVLDDG slr1641 MEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDG slr0156 MEKHAVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHLDVFNILLQVLDDG RP036 MEKHSISRLIGAPPGYIGYDQGGVLTESVRRRPYQVILFDEVEKAHLDIFNIMLQILDEG L166407 MEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRNPYTIILLDEIEKAHPDVFNILLQVLDDG MPN531 MEKHSVAKLIGAPPGYVGYEQSGLLTEAVRRKPYCVLLFDEIEKAHPDVTNILLQVLDDG MG355 MEKHSVAKLIGAPPGYIGYEQSGLLTEAVRRKPYSVLLFDEIEKAHPDVTNVLLQVLDDG UU391 MEKHSVSKLVGAPPGYIGYENAGVLTESVKRKPYSILLFDEIEKAHPDILNILLQILDEG ****::::*:******:**::.* *:* ::*.** ::*:**:**** *: *::**:**:* NMA1683 RLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ-MGIQD--YEAVKEVVMEDVKEHFRPEMIN NMB1472 RLTDGQGRTVDFKNTVIVMTSNIGSQHIQQ-MGIQD--YEAVKEVVMEDVKEHFRPEMIN HI0859 RLTDGQGRTVDFRNTVVIMTSNLGSDLIQG-NKDES--YSEMKALVMSVVSQHFRPEFIN slr1641 RLTDAQGHVVDFKNTIIIMTSNLGSQYILD-VAGDDSRYEEMRSRVMDVMRENFRPEFLN slr0156 RITDSQGRVVDFRNTIIVMTSNIGSDHILS-LSADDADYDKMQKQVLQSLRKHFRPEFLN RP036 RLTDSQGITVDFKNTIIVLTSNLGAEILVN-QKEGE-DTYKVRDEVMQYVRAVFKPEFLN L166407 RLTDSKGVLVDFKNTVLIMTSNVGSQYLLDNVGENGEISEETTENVMSQLRAHFKPEFLN MPN531 TLKDSQGRLVNFKNTMIIMTSNLGSNYIME----------NKRDLAMEALKKHFRAEFIN MG355 TLKDSQGRVVNFKNTLIIMTSNLGSNFLLE----------GKKDLAIQSLKKHFRPEFIN UU391 SIKDAKNNEINFKNTIIIMTSNIGAEALLE----------NNKTKALLDLQKTFKPEILN :.*.:. ::*:**::::***:*:: : .: : *:.*::* NMA1683 RIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGAR NMB1472 RIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLAVSDAALDIIAKAGFDPIYGAR HI0859 RIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGAR slr1641 RVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGAR slr0156 RIDDLIIFHTLKRDELRRIVVLQIKRIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGAR RP036 RLDEIILFHRLNRNNIHDIVKIQLGSLKKILLQQNIILEFDESALNYLAEKGYDPSFGAR L166407 RIDDTILFKPLALEDIKNIIVKMTSQLSHRLEEMDVQLELSEEVKVWIAENAYEPAYGAR MPN531 RIDEIVFFSVLQKTTVLEIITNLLDQLNQRLAKQNLKFTFDPKLNEFIYKSSFDEQFGAR MG355 RIDEIVFFNVLEKDTVLSIINSLLAQLSKRLNKQNLFFNFDSNLTEFIYKSSFDQQFGAR UU391 RISEIIFFNKLSKEIIFKISENLLKELENLLAKQDYLIKFDDNIAQIMVEDAYSSNYGAR *:.: :.* * : * : : : . : .:. :*** NMA1683 PLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA------------------- NMB1472 PLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA------------------- HI0859 PLKRAIQQEIENSLAQQILSGALLPGKVVTIDYANAEVQARQ------------------ slr1641 PLKRAVQKYLETAIAKGILRGDYKPGETIVVDETDERLSF------TSLRG----DLVIV slr0156 PLKRAIQRQLENPIATKILENTFVAGDKILIDCVDGQLIFDKEIEPTTLPEEPEENITAV RP036 PLKRLIQREIQNNLAKMILAGEISSGNTVKIRREKEELSINIID---------------- L166407 PLKRYLTKVIENPLAKLIIGGKIPPKSKVIVTLVENKIDFDIQTIAE------------- MPN531 PIKRFIDRQIATLIAKQILEGIITKDVSYNVIVEKDKVAIVANKVKS------------- MG355 PIKRFIDHSVATLIAKYILQGKIKKGVGYNIAVVKDNITITQNNKS-------------- UU391 PLKRWITKHLENEIAKLIIENRITKNINYKINYDRELDQVLIK----------------- *:** : : . :* :: . : NMA1683 ------- NMB1472 ------- HI0859 ------- slr1641 ------- slr0156 EVEVLSS RP036 ------- L166407 ------- MPN531 ------- MG355 ------- UU391 -------