Sequence format is Pearson Sequence 1: gi|15673845|isoleucyl-tRNA 932 aa Sequence 2: gi|24379039isoleucine-tRNA 930 aa Sequence 3: gi|15901494isoleucyl-tRNA 930 aa Sequence 4: gi|15903545Isoleucyl-tRNA 930 aa Sequence 5: gi|25010601isoleucyl-tRNA 930 aa Sequence 6: gi|22536664isoleucyl-tRNA 930 aa Sequence 7: gi|16804058isoleucyl-tRNA 921 aa Sequence 8: gi|16801193isoleucyl-tRNA 921 aa Sequence 9: gi|15615108isoleucyl-tRNA 921 aa Sequence 10: gi|16078607|isoleucyl-tRNA 921 aa Sequences (1:2) Aligned. Score: 63.7634 Sequences (1:3) Aligned. Score: 61.9355 Sequences (1:4) Aligned. Score: 61.828 Sequences (1:5) Aligned. Score: 61.0753 Sequences (1:6) Aligned. Score: 60.9677 Sequences (1:7) Aligned. Score: 60.8035 Sequences (1:8) Aligned. Score: 60.5863 Sequences (1:9) Aligned. Score: 58.7405 Sequences (1:10) Aligned. Score: 59.2834 Sequences (2:2) Aligned. Score: 100 Sequences (2:3) Aligned. Score: 77.7419 Sequences (2:4) Aligned. Score: 77.8495 Sequences (2:5) Aligned. Score: 79.6774 Sequences (2:6) Aligned. Score: 79.8925 Sequences (2:7) Aligned. Score: 58.3062 Sequences (2:8) Aligned. Score: 58.1976 Sequences (2:9) Aligned. Score: 53.9631 Sequences (2:10) Aligned. Score: 55.5917 Sequences (3:2) Aligned. Score: 77.7419 Sequences (3:3) Aligned. Score: 100 Sequences (3:4) Aligned. Score: 99.7849 Sequences (3:5) Aligned. Score: 78.3871 Sequences (3:6) Aligned. Score: 78.4946 Sequences (3:7) Aligned. Score: 57.7633 Sequences (3:8) Aligned. Score: 57.4376 Sequences (3:9) Aligned. Score: 52.9859 Sequences (3:10) Aligned. Score: 54.3974 Sequences (4:2) Aligned. Score: 77.8495 Sequences (4:3) Aligned. Score: 99.7849 Sequences (4:4) Aligned. Score: 100 Sequences (4:5) Aligned. Score: 78.2796 Sequences (4:6) Aligned. Score: 78.3871 Sequences (4:7) Aligned. Score: 57.8719 Sequences (4:8) Aligned. Score: 57.5461 Sequences (4:9) Aligned. Score: 52.9859 Sequences (4:10) Aligned. Score: 54.506 Sequences (5:2) Aligned. Score: 79.6774 Sequences (5:3) Aligned. Score: 78.3871 Sequences (5:4) Aligned. Score: 78.2796 Sequences (5:5) Aligned. Score: 100 Sequences (5:6) Aligned. Score: 99.6774 Sequences (5:7) Aligned. Score: 56.0261 Sequences (5:8) Aligned. Score: 56.0261 Sequences (5:9) Aligned. Score: 54.2888 Sequences (5:10) Aligned. Score: 54.8317 Sequences (6:2) Aligned. Score: 79.8925 Sequences (6:3) Aligned. Score: 78.4946 Sequences (6:4) Aligned. Score: 78.3871 Sequences (6:5) Aligned. Score: 99.6774 Sequences (6:6) Aligned. Score: 100 Sequences (6:7) Aligned. Score: 56.0261 Sequences (6:8) Aligned. Score: 56.0261 Sequences (6:9) Aligned. Score: 54.1802 Sequences (6:10) Aligned. Score: 54.7231 Sequences (7:2) Aligned. Score: 58.3062 Sequences (7:3) Aligned. Score: 57.7633 Sequences (7:4) Aligned. Score: 57.8719 Sequences (7:5) Aligned. Score: 56.0261 Sequences (7:6) Aligned. Score: 56.0261 Sequences (7:7) Aligned. Score: 100 Sequences (7:8) Aligned. Score: 99.4571 Sequences (7:9) Aligned. Score: 65.1466 Sequences (7:10) Aligned. Score: 67.2096 Sequences (8:2) Aligned. Score: 58.1976 Sequences (8:3) Aligned. Score: 57.4376 Sequences (8:4) Aligned. Score: 57.5461 Sequences (8:5) Aligned. Score: 56.0261 Sequences (8:6) Aligned. Score: 56.0261 Sequences (8:7) Aligned. Score: 99.4571 Sequences (8:8) Aligned. Score: 100 Sequences (8:9) Aligned. Score: 65.038 Sequences (8:10) Aligned. Score: 66.8838 Sequences (9:2) Aligned. Score: 53.9631 Sequences (9:3) Aligned. Score: 52.9859 Sequences (9:4) Aligned. Score: 52.9859 Sequences (9:5) Aligned. Score: 54.2888 Sequences (9:6) Aligned. Score: 54.1802 Sequences (9:7) Aligned. Score: 65.1466 Sequences (9:8) Aligned. Score: 65.038 Sequences (9:9) Aligned. Score: 100 Sequences (9:10) Aligned. Score: 71.4441 Sequences (10:2) Aligned. Score: 55.5917 Sequences (10:3) Aligned. Score: 54.3974 Sequences (10:4) Aligned. Score: 54.506 Sequences (10:5) Aligned. Score: 54.8317 Sequences (10:6) Aligned. Score: 54.7231 Sequences (10:7) Aligned. Score: 67.2096 Sequences (10:8) Aligned. Score: 66.8838 Sequences (10:9) Aligned. Score: 71.4441 Sequences (10:10) Aligned. Score: 100 Guide tree file created: [clustal.dnd] Start of Multiple Alignment There are 9 groups Aligning... Group 1: Sequences: 2 Score:20209 Group 2: Sequences: 3 Score:18513 Group 3: Sequences: 2 Score:20199 Group 4: Sequences: 5 Score:18334 Group 5: Sequences: 6 Score:16723 Group 6: Sequences: 2 Score:19990 Group 7: Sequences: 2 Score:17548 Group 8: Sequences: 4 Score:16740 Group 9: Sequences: 10 Score:15404 Alignment Score 177224 CLUSTAL-Alignment file created [clustal.aln] -------------------------------------------------------------------------------- Clustal output gi|25010601isoleucyl-tRNA MKLKETLNLGQTAFPMRAGLPNKEPQWQEAWDQADIYKKRQALNEGKPAF gi|22536664isoleucyl-tRNA MKLKETLNLGQTAFPMRAGLPNKEPQWQEAWDQADIYKKRQALNEGKPAF gi|24379039isoleucine-tRNA MKLKETLNLGKTAFPMRAGLPNKEPQWQKQWDEANIYAKRQELNANKPAF gi|15901494isoleucyl-tRNA MKLKDTLNLGKTEFPMRAGLPTKEPVWQKEWEDAKLYQRRQELNQGKPHF gi|15903545Isoleucyl-tRNA MKLKDTLNLGKTEFPMRAGLPTKEPVWQKEWEYAKLYQRRQELNQGKPHF gi|15673845|isoleucyl-tRNA MKIKDTLNLGKTAFPMRAGLPNKEPNWQKDWADATLYEKRQELNEGKPSF gi|16804058isoleucyl-tRNA MEYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRPTY gi|16801193isoleucyl-tRNA MEYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKNAGRKAY gi|15615108isoleucyl-tRNA MDFKETLLMPKTDFPMRGNLPNREPQMQEEWKDMNIYEKVQARTKGRPLF gi|16078607|isoleucyl-tRNA MDFKDTLLMPKTDFPMRGNLPNREPDIQKKWEEEDIYRLVQERTKDRPKF *. *:** : :* ****..**.:** * * :* * . .: : gi|25010601isoleucyl-tRNA HLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLP gi|22536664isoleucyl-tRNA HLHDGPPYANGNIHVGHALNKISKDIIVRSKSMSGFRAPYVPGWDTHGLP gi|24379039isoleucine-tRNA FLHDGPPYANGNIHVGHALNKISKDIIIRSKSMSGFRAPYIPGWDTHGLP gi|15901494isoleucyl-tRNA TLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLP gi|15903545Isoleucyl-tRNA TLHDGPPYANGNIHVGHAMNKISKDIIVRSKSMSGFYAPFIPGWDTHGLP gi|15673845|isoleucyl-tRNA MLHDGPPYANGNIHLGHSLNKISKDIIVRYKSMAGFRAPYVPGWDTHGLP gi|16804058isoleucyl-tRNA ILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLP gi|16801193isoleucyl-tRNA ILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLP gi|15615108isoleucyl-tRNA VLHDGPPYANGDIHMGHALNKVLKDMIVRYKSMAGFHAPYVPGWDTHGLP gi|16078607|isoleucyl-tRNA VLHDGPPYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLP **********::*:**::** **:*:* ***:*: :*::********* gi|25010601isoleucyl-tRNA IEQVLAKKG-VKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE gi|22536664isoleucyl-tRNA IEQVLAKKG-VKRKEMDLAEYLEMCRDYALSQVDKQRDDFKRLGVSADWE gi|24379039isoleucine-tRNA IEQVLAKKG-VKRKEIDLADYLDMCRQYALSQVDKQRQDFKRLGVSGDWE gi|15901494isoleucyl-tRNA IEQVLSKQG-VKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWE gi|15903545Isoleucyl-tRNA IEQVLSKQG-VKRKEMDLVEYLKLCREYALSQVDKQREDFKRLGVSGDWE gi|15673845|isoleucyl-tRNA IEQQLAKAG-MKRKEMDLLDYLEECRKYAMKQVDMQRSDFKSLGVLADWD gi|16804058isoleucyl-tRNA IETAIAKKG-VKRKEMSIAEFRKLCAEYAMKQVDGQRTGFKRLGINGDWE gi|16801193isoleucyl-tRNA IETAIAKKG-VKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWE gi|15615108isoleucyl-tRNA IEQALTKSG-VDRKSMSVAEFRKLCEEFARKQIDRQREQFMRLGVRGDWW gi|16078607|isoleucyl-tRNA IETALTKNKKVNRKEMSVAEFRKLCEEYAWKQIEGQREQFKRLGVRGDWE ** ::* :.**.:.: :: . * .:* .*:: ** * **: .** gi|25010601isoleucyl-tRNA NPYITLTPDYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIE gi|22536664isoleucyl-tRNA NPYITLTPDYEADQVRVFGAMADKGYIYRGAKPVYWSWSSESALAEAEIE gi|24379039isoleucine-tRNA NPYITLVPKYEAAQIRVFGAMADKGYIYHGAKPVYWSWSSESALAEAEIE gi|15901494isoleucyl-tRNA NPYVTLTPDYEAAQIRVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIE gi|15903545Isoleucyl-tRNA NPYVTLTPDYEAAQIRVFGEMANKGYIYRGAKPVYWSWSSESALAEAEIE gi|15673845|isoleucyl-tRNA RPYLTLLPEYEAAQIRVFGKMAEKGYIYKGQKPIYWSPSSESSLAEAEIE gi|16804058isoleucyl-tRNA NPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIE gi|16801193isoleucyl-tRNA NPYITLLPEYEAEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIE gi|15615108isoleucyl-tRNA NPYVTLDKGFEAQQVKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIE gi|16078607|isoleucyl-tRNA NPYVTLKPEYEAQQIRVFGEMAKRGYIYKGLKPVNWSPSSESALAEAEIE .**:** :** *::*** **.:****:* **: ** ****:******* gi|25010601isoleucyl-tRNA YHDIDSTSLYYANKVKDGKGILDTDTYIVVWTTTPFTVTASRGLTVGPDM gi|22536664isoleucyl-tRNA YHDIDSTSLYYANKVKDGKGILDTDTYIVVWTTTPFTVTASRGLTVGPDM gi|24379039isoleucine-tRNA YHDIDSTSLYYANRVKDGKDILDTDTYIVVWTTTPFTITASRGLTVGPDI gi|15901494isoleucyl-tRNA YHDLVSTSLYYANKVKDGKGVLDTDTYIVVWTTTPFTITASRGLTVGADI gi|15903545Isoleucyl-tRNA YHDLVSTSLYYANKVKDGKGVLDTDTYIVVWTTTPFTITASRGLTVGADI gi|15673845|isoleucyl-tRNA YQDVRSASIFVAFKAKDTKGKLPEDVEFVIWTTTPWTIPSNLGIFAHPDY gi|16804058isoleucyl-tRNA YQDKTSASIFVAFKVTDGKGVLDEGTNIVIWTTTPWTIPANMGITVNPDL gi|16801193isoleucyl-tRNA YQDKTSASIFVAFKVTDGKGVLDEGTNIVIWTTTPWTIPANMGITVNPDL gi|15615108isoleucyl-tRNA YHDKRSPSIYVAFPVKDGKNVLQQDEKIVIWTTTPWTIPANLGIAVHPEL gi|16078607|isoleucyl-tRNA YQDKRSASIYVAFGVKDGKGVLENGERIIIWTTTPWTIPANLGISVHPDL *:* *.*:: * ..* *. * . :::*****:*:.:. *: . .: gi|25010601isoleucyl-tRNA EYVVVAPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTE gi|22536664isoleucyl-tRNA EYVVVVPVGSERKYLLAEVLVDSLAAKFGWENFEIVTHHTGKELNHIVTE gi|24379039isoleucine-tRNA DYVVVKPANDERKFLVAQALLSELAERFAWDNPQVLATHKGIELDRIVTI gi|15901494isoleucyl-tRNA DYVLVQPAGEARKFVVAAELLTSLSEKFGWADVQVLETYRGQELNHIVTE gi|15903545Isoleucyl-tRNA DYVLVQPAGEARKFVVAAELLTSLSEKFGWADVQVLETYRGQELNHIVTE gi|15673845|isoleucyl-tRNA DYSVVAVNG--RKFVIASEMLEAVAEKLEWENPEVLQTIKGSELEYMVAK gi|16804058isoleucyl-tRNA DYVVIESAG--EKYVVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTK gi|16801193isoleucyl-tRNA DYVVIESAG--EKYVVAEALLPSLREKLGFEDATVVKTVRGSELDRVVTK gi|15615108isoleucyl-tRNA EYSVVAVKG--EKYVVASGLVETLESALEWENPEILRTIKGVDLEYVVAE gi|16078607|isoleucyl-tRNA EYSVIAVGE--DRFVVASALVENVASACGFDQYEVTRTVKGKDLENIIAE :* :: ::::* :: : : : : * :*: ::: gi|25010601isoleucyl-tRNA HPWDTEVEELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVT gi|22536664isoleucyl-tRNA HPWDTEVEELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLDVVVT gi|24379039isoleucine-tRNA HPWDDNVEELVMNGDHVTLDSGTGIVHTAPGFGEDDYNVGVKYGLDVVVT gi|15901494isoleucyl-tRNA HPWDTAVEELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGIANNLEVAVT gi|15903545Isoleucyl-tRNA HPWDTAVEELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGIANNLEVAVT gi|15673845|isoleucyl-tRNA HPFYDR-ETLIMNADYVTLDSGTGLVHVAPGHGEDDYFASRKYKLPVLSP gi|16804058isoleucyl-tRNA HPFYDR-DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAP gi|16801193isoleucyl-tRNA HPFYDR-DSLVMNGEHATAEAGTGAVHTAPGHGEDDFLIGKKYDLEILAP gi|15615108isoleucyl-tRNA HPIYGR-DSLVVLGDHVTLDAGTGCVHTAPGHGEEDYIVGQKYGLDVLCP gi|16078607|isoleucyl-tRNA HPLYGR-DSLVMLGEHVTTDAGTGCVHTAPGHGEDDFIIGQKYGLDVLCP ** : *:: .::.* ::*** **.***.**:*: . * : . gi|25010601isoleucyl-tRNA VDSRGLMMENAGPDFEGQFYDKVTPLVKEKLG--DLLLASEVINHSYPFD gi|22536664isoleucyl-tRNA VDSRGLMMENAGPDFEGQFYDKVTPLVKEKLG--DLLLASEVINHSYPFD gi|24379039isoleucine-tRNA VNERGIMMENAGPDFEGQFYDKVLPTVKEKLG--DLLLASEVITHSYPFD gi|15901494isoleucyl-tRNA VDERGIMMKNAGPEFEGQFYEKVVPTVIEKLG--NLLLAQEEISHSYPFD gi|15903545Isoleucyl-tRNA VDERGIMMKNAGPEFEGQFYEKVVPTVIEKLG--NLLLAQEEISHSYPFD gi|15673845|isoleucyl-tRNA IDNRGYYTDEA-PGLEGLLYDEGNKVVSKWLEEKDALLKLEFFTHSYPHD gi|16804058isoleucyl-tRNA LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHD gi|16801193isoleucyl-tRNA LDDRGVFTEEA-PGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSYPHD gi|15615108isoleucyl-tRNA VDDKGYMTAEA-PGFEGLFYDEANKPITQKLDECGALLKLTFITHSYAHD gi|16078607|isoleucyl-tRNA VDEKGVMTSEA-PGFEGMFYDDANKAITQQLDEKGALVKLEFITHSYPHD ::.:* :* * :** :*: : : * . *: :.***..* gi|25010601isoleucyl-tRNA WRTKKPIIWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRD gi|22536664isoleucyl-tRNA WRTKKPIIWRAVPQWFASVSKFRQEILDEIEKTNFQPEWGKKRLYNMIRD gi|24379039isoleucine-tRNA WRTKKPIIWRAVPQWFASVSKFRQDILDEIDKVHFYPAWGKTRLYNMIRD gi|15901494isoleucyl-tRNA WRTKKPIIWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRD gi|15903545Isoleucyl-tRNA WRTKKPIIWRAVPQWFASVSKFRQEILDEIEKVKFHSEWGKVRLYNMIRD gi|15673845|isoleucyl-tRNA WRTKKPVIFRATPQWFASIDDFRQNILDEVERVDWVIPWGKTRLFNMVRD gi|16804058isoleucyl-tRNA WRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRD gi|16801193isoleucyl-tRNA WRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRD gi|15615108isoleucyl-tRNA WRTKKPVIYRATAQWFASIENFRDELLRAIQEVKWVPEWGETRLYNMVRD gi|16078607|isoleucyl-tRNA WRTKKPTIFRATAQWFASIKDFRSDLLDAIKETKWVPEWGEQRLHNMVRD ****** *:**..*****:. **.::* :. ..: **: **.**:** gi|25010601isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVTDHVADLFAEYGSIVWWQ gi|22536664isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVTDHVADLFAEYGSIVWWQ gi|24379039isoleucine-tRNA RGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVTDHIANLFEEHGSVIWWQ gi|15901494isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYAEDGTAIMVAETIEHVAQLFEEYGSSIWWE gi|15903545Isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYAEDGTAIMVAETIEHVAQLFEEHGSSIWWE gi|15673845|isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYGENGEPIITPETTEHVAKLFAEFGSKVWFE gi|16804058isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFE gi|16801193isoleucyl-tRNA RGDWVISRQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFE gi|15615108isoleucyl-tRNA RGDWCISRQRVWGVPIPIFYGENGEPIITDETINHVSELFRKHGSNVWFE gi|16078607|isoleucyl-tRNA RGDWCISRQRAWGVPIPVFYAENGEPVITDETIEHVSELFRQHGSNIWFE **** *****.****:*:**.*:* .::. *. :*::.** :.** :*:: gi|25010601isoleucyl-tRNA RDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVMNARENLSY gi|22536664isoleucyl-tRNA RDAKDLLPAGYTHPGSPNGLFEKETDIMDVWFDSGSSWNGVMNARENLSY gi|24379039isoleucine-tRNA REAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVLNTREDLGY gi|15901494isoleucyl-tRNA RDAKDLLPEGFTHPGSPNGEFKKETDIMDVWFDSGSSWNGVVVNRPELTY gi|15903545Isoleucyl-tRNA RDAKDLLPEGFTHPGSPNGEFKKETDIMDVWFDSGSSWNGVVVNRPELTY gi|15673845|isoleucyl-tRNA REAKDLLPEGFTHPASPNGEFTKEKDIMDVWFDSGSSWNGVLNERDYLSF gi|16804058isoleucyl-tRNA RDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARPELSR gi|16801193isoleucyl-tRNA RDVKDLLPAGFTHPGSPNGEFTKETDIMDVWFDSGSSHQAVLNARPELSR gi|15615108isoleucyl-tRNA WETKDLLPEGFTHESSPNGQFTREMDIMDVWFDSGSSHQGVLVEREELDR gi|16078607|isoleucyl-tRNA KEAKDLLPEGFTHPGSPNGTFTKEQDIMDVWFDSGSSHQAVLEERDDLVR :.***** *:** .**** * :* ************ :.*: * * gi|25010601isoleucyl-tRNA PADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMS gi|22536664isoleucyl-tRNA PADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMS gi|24379039isoleucine-tRNA PADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMS gi|15901494isoleucyl-tRNA PADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMS gi|15903545Isoleucyl-tRNA PADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMS gi|15673845|isoleucyl-tRNA PADLYLEGSDQYRGWFNSSITTSVAVNGVAPYKAVLSQGFVLDGKGRKMS gi|16804058isoleucyl-tRNA PADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMS gi|16801193isoleucyl-tRNA PADLYMEGSDQYRGWFNSSLTTAVAITGEAPYRNVLSHGFALDGEGRKMS gi|15615108isoleucyl-tRNA PADLYLEGSDQYRGWFNSSLSTSVAITGKAPYKGVLSHGFTLDGEGKKMS gi|16078607|isoleucyl-tRNA PADLYLEGSDQYRGWFNSSLSTAVAVTGKAPYKGVLSHGFALDGEGRKMS *****:*************: *:** * ***: :**:**.***:*.*** gi|25010601isoleucyl-tRNA KSLGNTILPSDVEKQFGAEILRLWVTSVDSSNDVRISMDILKQTSEIYRK gi|22536664isoleucyl-tRNA KSLGNTILPSDVEKQFGAEILRLWVTSVDSSNDVRISMDILKQTSETYRK gi|24379039isoleucine-tRNA KSKGNIISPNDVAKQYGAEILRLWVASVDTDSDVRVSMEILGQVSETYRK gi|15901494isoleucyl-tRNA KSLGNTIAPSDVEKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRK gi|15903545Isoleucyl-tRNA KSLGNTIAPSDVEKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRK gi|15673845|isoleucyl-tRNA KSIGNTIVPKDVTKKFGADILRLWVASIDTESDVRVSMDILSQVSEVYRK gi|16804058isoleucyl-tRNA KSLGNTLLPGKVIKQLGADIVRLWVASVDYQADVRVSDEILKQVSEVYRK gi|16801193isoleucyl-tRNA KSLGNTLLPGKVIKQLGADIVRLWVASVDYQADVRVSDEILKQVSEVYRK gi|15615108isoleucyl-tRNA KSLGNVVIPNDVMKQLGADILRLWVASVDYQADVRVSDKILKQVSEVYRK gi|16078607|isoleucyl-tRNA KSIGNVVVPAKVMKQLGADILRLWVSSVDYQADVRVSDAILKQVAEVYRK ** ** : * .* *: **:*:****:*:* . ***:* ** *.:* *** gi|25010601isoleucyl-tRNA IRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTIKFNQVVDTINKAYA gi|22536664isoleucyl-tRNA IRNTLRFLIANTSDFNPKQDAVAYENLGAVDRYMTIKFNQVVDTINKAYA gi|24379039isoleucine-tRNA IRNTLRFLIANTTDFNPYINKIAFEDLRSVDKYMLIKFNQLVSVINRAYS gi|15901494isoleucyl-tRNA IRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQLVKTIRDAYA gi|15903545Isoleucyl-tRNA IRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMTIRFNQLVKTIRDAYA gi|15673845|isoleucyl-tRNA IRNTLRFLIANTSDFNPKEDAIDFAELRPVDKYMLVKFNELVKQIRTAYD gi|16804058isoleucyl-tRNA IRNTMRFLLGNINDFNPTTNTVSYENLREVDKYMLIKLNDLVKNVKDSYE gi|16801193isoleucyl-tRNA IRNTMRFLLGNINDFNPTTNGVSYENLREVDKYMLIKLNDLVKNVKDSYE gi|15615108isoleucyl-tRNA IRNTYRFLLGNLHDFHPATHRVAIDQLNGLDRYMLAKLNDVINRVKKAYD gi|16078607|isoleucyl-tRNA IRNTFRFLHGNLFDFDPKTNAVAVEDLREVDQYMLIKLNKLIDKVKKAYD **** *** .* **.* . : :* :*:** ::*.::. :. :* gi|25010601isoleucyl-tRNA AYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYD gi|22536664isoleucyl-tRNA AYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEAANSPERRRMQTVFYD gi|24379039isoleucine-tRNA HYDFMTIYKAVVNFVTVDLSAFYLDFAKDVVYIEAADDLARRQMQTVFYE gi|15901494isoleucyl-tRNA DFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFYD gi|15903545Isoleucyl-tRNA DFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIEGAKSLERRQMQTVFYD gi|15673845|isoleucyl-tRNA NYSFMTVYKSIINFITNDLSSFYLDFAKDVVYIEAANSPERRSMQTVMYV gi|16804058isoleucyl-tRNA AFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYE gi|16801193isoleucyl-tRNA AFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQTVFYE gi|15615108isoleucyl-tRNA EYQFSTVYHELHNFCTIELSSFYMDIAKDTLYVKHADHPDRRATQTVMYD gi|16078607|isoleucyl-tRNA EYEFAVVYHSIHNFCTIELSSFYLDFAKDIVYIEHADHPDRRSMQTVSYE :.* .:*: : ** . :** **:*:*** :*:: *. ** *** * gi|25010601isoleucyl-tRNA ILVKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSGQEEIL gi|22536664isoleucyl-tRNA ILVKLTKLLTPILPHTAEEIWSYLEHEEEEFVQLAEMPVAQTFSGQEEIL gi|24379039isoleucine-tRNA ILVNITKLLTPILPHTSEEIWSYLEHEEEAFVQLAEMPEAQEFANQDEIL gi|15901494isoleucyl-tRNA ILVKITKLLTPILPHTAEEIWSYLEFETEDFVQLSELPEVQTFANQEEIL gi|15903545Isoleucyl-tRNA ILVKITKLLTPILPHTAEEIWSYLEFETEDFVQLSELPEVQTFANQEEIL gi|15673845|isoleucyl-tRNA ILKDLVKILVPILPHTAEETWTYLEHEPENFAYLAEMPEAAEIPGSEELL gi|16804058isoleucyl-tRNA AVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDLPDVKVLANSEEIT gi|16801193isoleucyl-tRNA AVVTLTKLLAPILPHTTEEVWNSLIGEGAESIHLQDLPDVKVLADSEEIT gi|15615108isoleucyl-tRNA VLVALAKLLSPIIPHTADEVWKHIPGVEEESVQLTDMPEPIELGDVSELK gi|16078607|isoleucyl-tRNA TLLALVKLSAPILPHTADELWSHLTFVEEQSVQLTDMPETITVPNSEATE : :.*: **:***::* *. : * ::* . . . gi|25010601isoleucyl-tRNA EEWSAFMTLRTQAQKALEEARNAKVIGKSLEAHLTIYASQEVKTLLTALN gi|22536664isoleucyl-tRNA EEWSAFMTLRTQAQKALEEARNAKVIGKSLEAHLTIYASQEVKTLLTALN gi|24379039isoleucine-tRNA DTWSAFMSLRDQAQKALEEARNAKIIGKSLEAHLTVYASEEVKTLLTALD gi|15901494isoleucyl-tRNA DTWAAFMDFRGQAQKALEEARNAKVIGKSLEAHLTVYPNEVVKTLLEAVN gi|15903545Isoleucyl-tRNA DTWAAFMDFRGQAQKALEEARNAKVIGKSLEAHLTVYPNEVVKTLLEAVN gi|15673845|isoleucyl-tRNA GNWQEFLDFRDKILKALESAREAKLIGKSLEATVTIYPNEVVRTLLTAID gi|16804058isoleucyl-tRNA AKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVDGEAKTLFDSLE gi|16801193isoleucyl-tRNA AKWDAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVDGEAKTLFDSLE gi|15615108isoleucyl-tRNA QKWDAFINVRDDVLKALENARNEKVIGKSLTAAITLYADGDVRQLLEELG gi|16078607|isoleucyl-tRNA EKFDRFMALRDDVLKALETARNEKIIGKSLEANLKLYPNKENKELLASIK : *: .* . **** **: *:****: * :.:* . : *: : gi|25010601isoleucyl-tRNA SDIALLMIVSQLTIADEAD--KPADSVSFEGVAFTVEHAEGEVCERSRRI gi|22536664isoleucyl-tRNA SDIALLMIVSQLTIADEAD--KPADSVSFEGVAFTVEHAEGEVCERSRRI gi|24379039isoleucine-tRNA SNIAQLLIVSQLTVTQEQ---APKNALVFEDVAFSVEHARGHVCDRCRRI gi|15901494isoleucyl-tRNA SNVAQLLIVSELTIAEGP---APEAALSFEDVAFTVERATGEVCDRCRRI gi|15903545Isoleucyl-tRNA SNVAQLLIVSELTIAEGP---APEAALSFEDVAFTVERATGEVCDRCRRI gi|15673845|isoleucyl-tRNA ENVAQLLIVSNFVVANEPVNNAPESAMKFDDLAVLVEHAAGEVCDRCRRT gi|16804058isoleucyl-tRNA GDFAQLFIVSDFELVEGLEN-APESAFKSNQVAVQITVAEGETCERCRVV gi|16801193isoleucyl-tRNA GDFAQLFIVSDFELVEGLEN-APESAFKSNQVAVQITVAEGETCERCRVV gi|15615108isoleucyl-tRNA P-LDKLFIVSAVKVAGSVAD-APKEAESYDDLAIVVEKAVGETCERCWVV gi|16078607|isoleucyl-tRNA ENLSQLFIVSELTIS-EENE-APNDAQSFATGKIAVEKAEGEMCERSRVI . *:*** . : * : . : * *. *:*. gi|25010601isoleucyl-tRNA DPTTRMRS--YGVAVCDASAAIIEQYYPEAVAQGFEA- gi|22536664isoleucyl-tRNA DPTTKMRS--YGVAVCDASAAIIEQYYPEAVAQGFEA- gi|24379039isoleucine-tRNA DETVKERP--YHVTICNHCAAIVENHFPEAVRQGFESK gi|15901494isoleucyl-tRNA DPTTAERS--YQAVICDHCASIVEENFAEAVAEGFEEK gi|15903545Isoleucyl-tRNA DPTTAERS--YQAVICDHCASIVEENFAEAVAEGFEEK gi|15673845|isoleucyl-tRNA DETVGHNANEHLKMLCEHCAHIVETEFPEILEEGFED- gi|16804058isoleucyl-tRNA KKDVGVNP--KHPTLCGRCADIVVKHYEA--------- gi|16801193isoleucyl-tRNA KKDVGVNP--KHPTLCGRCADIVVKHYEA--------- gi|15615108isoleucyl-tRNA SPTVGTNN--EHPTLCADCAETVATYYVTK-------- gi|16078607|isoleucyl-tRNA SKDVGANP--KYPTLSLRNAEIVEKYYQK--------- . . . :. * : : -------------------------------------------------------------------------------- Tree construction Sequence format is Clustal Sequence 1: gi|25010601isoleucyl-tRNA 938 aa Sequence 2: gi|22536664isoleucyl-tRNA 938 aa Sequence 3: gi|24379039isoleucine-tRNA 938 aa Sequence 4: gi|15901494isoleucyl-tRNA 938 aa Sequence 5: gi|15903545Isoleucyl-tRNA 938 aa Sequence 6: gi|15673845|isoleucyl-tRNA 938 aa Sequence 7: gi|16804058isoleucyl-tRNA 938 aa Sequence 8: gi|16801193isoleucyl-tRNA 938 aa Sequence 9: gi|15615108isoleucyl-tRNA 938 aa Sequence 10: gi|16078607|isoleucyl-tRNA 938 aa Phylogenetic tree file created: [clustal.ph] +--1:gi|25010601isoleucyl-tRNA +----------13 +-12 +--2:gi|22536664isoleucyl-tRNA | | | +----------3:gi|24379039isoleucine-tRNA -11 | +--4:gi|15901494isoleucyl-tRNA | +-----------14 | | +--5:gi|15903545Isoleucyl-tRNA +-15 | +------------------6:gi|15673845|isoleucyl-tRNA | | +--------16 +--7:gi|16804058isoleucyl-tRNA | +----------------18 | | +--8:gi|16801193isoleucyl-tRNA +-----17 | +----------------9:gi|15615108isoleucyl-tRNA +---19 +--------------10:gi|16078607|isoleucyl-tRNA Midpoint-rooted tree: +--1:gi|25010601isoleucyl-tRNA +-------------------13 +-12 +--2:gi|22536664isoleucyl-tRNA | | +---------------15 +-------------------3:gi|24379039isoleucine-tRNA | | | | +--4:gi|15901494isoleucyl-tRNA +----16 +---------------------14 | | +--5:gi|15903545Isoleucyl-tRNA | | | +---------------------------------6:gi|15673845|isoleucyl-tRNA -11 | +--7:gi|16804058isoleucyl-tRNA | +------------------------------18 | | +--8:gi|16801193isoleucyl-tRNA +-----17 | +-----------------------------9:gi|15615108isoleucyl-tRNA +-------19 +--------------------------10:gi|16078607|isoleucyl-tRNA Remember, this is an unrooted tree! -------------------------------------------------------------------------------- Bootstrapping tree CLUSTAL W (1.81) Multiple Sequence Alignments Sequence format is Clustal Sequence 1: gi|25010601isoleucyl-tRNA 938 aa Sequence 2: gi|22536664isoleucyl-tRNA 938 aa Sequence 3: gi|24379039isoleucine-tRNA 938 aa Sequence 4: gi|15901494isoleucyl-tRNA 938 aa Sequence 5: gi|15903545Isoleucyl-tRNA 938 aa Sequence 6: gi|15673845|isoleucyl-tRNA 938 aa Sequence 7: gi|16804058isoleucyl-tRNA 938 aa Sequence 8: gi|16801193isoleucyl-tRNA 938 aa Sequence 9: gi|15615108isoleucyl-tRNA 938 aa Sequence 10: gi|16078607|isoleucyl-tRNA 938 aa Phylogenetic tree file created: [clustal.ph] ------------------------------------------------------------------------------------------------------