CSE 590TV: Computational Biology

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References Links Standard genetic code Completed genomes NCBI BLAST server CMBI CLUSTAL W server Genomatix DiAlign server ExPASy SIM - pairwise alignment tool FootPrinter - phylogenetic footprinting tool MEME motif discovery tool Gibbs sampler motif discovery tool UCSC Human Genome Browser Course webs CSE 527: Introduction to Computational Biology. CSE 590CB: Computational Biology seminar. Genome 540/541: Introduction to Computational Molecular Biology: Genome and Protein Sequence Analysis . Textbooks Durbin, Richard, Eddy, Sean R., Krogh, Anders and Mitchison, Graeme, Biological Sequence Analysis: Probabilistic models of proteins and nucleic acids. Cambridge University Press, 1998. Ewens, Warren J and Grant, Gregory R, Statistical Methods in Bioinformatics : An Introduction. Springer, 2001. Gusfield, Dan, Algorithms on Strings, Trees, and Sequences. Cambridge University Press, 1997. Krane, Dan and Raymer, Michael, Fundamental Concepts of Bioinformatics. Benjamin Cummings, 2002. Pevzner, Pavel, Computational Molecular Biology: An Algorithmic Approach. MIT Press, 2000. Salzberg, Steven L., Searls, David B. and Kasif, Simon eds. Computational Methods in Molecular Biology. Elsevier, 1998. Primers Molecular Biology for Computer Scientists, a primer by Lawrence Hunter A Quick Introduction to Elements of Biology, a primer by Alvis Brazma et al. Genetics primer S-Star Bioinformatics Online Course Schedule, a collection of video primers Mathematics Challenges from Genomics and Molecular Biology, a primer by Richard Karp Burge's top 10 bioinformatics challenges Computational Biology at UW CSE's Computational Molecular Biology research group Interdisciplinary Ph.D. program in Computational Molecular Biology Portions of the CSE 590TV Web may be reprinted or adapted for academic nonprofit purposes, providing the source is accurately quoted and duly credited. The CSE 590TV Web: © 1993-2003, Department of Computer Science and Engineering, University of Washington.

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