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Huei-Hun Elizabeth Tseng Dept. of Computer Science & Engineering, U of Washington lachesis at cs.washington.edu |
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Huei-Hun Elizabeth Tseng Dept. of Computer Science & Engineering, U of Washington lachesis at cs.washington.edu |
My research field is Computational Biology, and my project at UW CSE focuses on discovering non-coding RNAs. I'm currently also involved in a metagenomics project at the Fred Hutchinson Cancer Research Center. In the past I did research for discovering cancer drug markers, modeling drug penetration in solid tumors, and finding genetic modules.
Outside school (where the time-spent ratio of school:non-school = 1:9), I like to travel, hike, sing, and shop. I'm learning yoga, and want to learn rock-climbing soon.
SLIDES about work I'm involved in
- 2009.06.01 A UW CMB symposium talk on my continuing work in discovering ncRNAs using a quasi-clique approach (.pptx slides)
- 2009.04.27 Finding Extremely Constrained Regions in Multiple Species Alignment (.pptx slides only contain the introduction and results, methodology was given on whiteboard)
- 2008.05.04 Finding Non-coding RNAs through genomic-scale clustering (.ppt slides)
PUBLICATIONS & WORKS
- Finding non-coding RNAs through genome-scale clustering (Extended version of the 2008 Proceedings paper with refined methodology and evaluation), Journal of Bioinformatics and Computational Biology, 2009.
- Finding non-coding RNAs through genome-scale clustering, Proceedings of the 6th Asian Pacific Bioinformatics Conference, 2008.
- C N Hsu, J M Lai, Detection of the inferred interaction network in hepatocellular carcinoma from EHCO, BMC Bioinformatics, 2007
- L J Su, S L Hsu, Global gene expression profiling of dimenthylnitrosamine-induced liver fibrosis: from pathological and biochemical data to microarray analysis., Gene Expr., 2006
- H W Huang, A C Tien, POINT: a database for the prediction of protein-protein interactions based on the orthologous interactome, Bioinformatics 2004.
CLASSES
- Computability and Complexity
- Design and Analysis of Algorithms I
- Computer Vision ( see my group's final project )
- Computer Graphics ( see Artifacts I made for each project )
- Computational Biology
- Introduction to Computational Molecular Biology: Molecular Evolution (GENOME 541)
PLACES I've been to include Japan (Kyoto photo selection), Spain (journal for pictures and comments in Chinese ), Beijing (flash picture slideshow ), Italy, Malaysia, etc...