Computational Molecular Biology Group

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Faculty  Larry Ruzzo  Martin Tompa Adjunct Faculty  Phil Green  Bill Noble  Maynard Olson Current Students  Dan Grossman  Jochen Jäger  Don Patterson  Amol Prakash  Emily Rocke  Brian Tjaden  Tammy VanDeGrift  Zasha Weinberg  Ken Yasuhara  Zizhen Yao Former Students  Mathieu Blanchette  Jeremy Buhler  Agatha Liu  Brendan Mumey  Saurabh Sinha  Ka Yee Yeung Courses  CSE 527  CSE 590TV  CSE 590CB

We are working on a wide variety of algorithmic problems for annotating genomic DNA, discovering regulatory motifs in DNA and protein sequences, inferring regulatory relationships among genes, and analyzing gene expression data.  Summary of local projects in computational molecular biology Summary of interdisciplinary collaborations Software Technical Reports and Journal Supplements The CSE Department is part of UW's Interdisciplinary Graduate Program in Computational Molecular Biology Our department also conducts research into how the brain computes, and how we can profitably emulate its computational model in hardware and AI. More information on neurally-inspired computing is available on these faculty members' home pages: Chris Diorio (or see his research page) Rajesh Rao

	Computer Science & Engineering University of Washington Box 352350 Seattle, WA  98195-2350 (206) 543-1695 voice, (206) 543-2969 FAX [comments to bio-webmaster]